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Biology, Medicine and Bioinformatics

Published entries filed under “Biology, Medicine and Bioinformatics” in MCP, newest first by publication date on this site.

46 entries

  1. ajibadedapo/flowproof-mcp

    Run reproducible Nextflow bioinformatics pipelines with verifiable Workflow Run RO-Crate provenance: container digests, tool versions and checksums.

    Biology, Medicine and Bioinformatics

  2. ammawla/encode-toolkit

    Search, download, track and analyze functional genomics experiments from the ENCODE Project.

    Biology, Medicine and Bioinformatics

  3. cafferychen777/ChatSpatial

    Spatial transcriptomics analysis: cell annotation, deconvolution, spatial statistics and visualization.

    Biology, Medicine and Bioinformatics

  4. Crindo2/gph-mcp-server

    Match US medical practices with healthcare service vendors for billing, credentialing, EHR, compliance and legal.

    Biology, Medicine and Bioinformatics

  5. davidmosiah/google-health-mcp

    Local-first access to the Google Health API for Fitbit and Pixel Watch activity, sleep, heart, nutrition and reconciled health data.

    Biology, Medicine and Bioinformatics

  6. davidmosiah/wellness-cgm-mcp

    Local-first continuous glucose monitor data from the Dexcom Developer API and FreeStyle Libre via LibreLink Up.

    Biology, Medicine and Bioinformatics

  7. davidmosiah/wellness-nourish

    Nutrition and hydration tracking: food search, barcode lookup, meal estimation, intake logs and daily summaries.

    Biology, Medicine and Bioinformatics

  8. dnaerys/onekgpd-mcp

    Real-time access to the 1000 Genomes Project dataset.

    Biology, Medicine and Bioinformatics

  9. ericblair1903/nutrients-mcp

    Nutrition analysis from a food photo or text description: calories, macros, vitamins, minerals, allergens and dietary flags.

    Biology, Medicine and Bioinformatics

  10. forever-healthy/evipedia-mcp

    Search Evipedia's evidence-based reviews of health and longevity interventions, fetch conclusions and metadata with PMIDs, and suggest new interventions.

    Biology, Medicine and Bioinformatics

  11. fulcradynamics/fulcra-context-mcp

    Access personal health and biometric data (sleep stages, heart rate, HRV, glucose, workouts), calendar and location via the Fulcra Life API.

    Biology, Medicine and Bioinformatics

  12. genomoncology/biomcp

    Access biomedical research data from PubMed, ClinicalTrials.gov and MyVariant.info.

    Biology, Medicine and Bioinformatics

  13. healthchainai/HealthChain

    Typed FHIR tools: build, read, validate and code FHIR resources from a patient bundle, with terminology lookup and machine-readable validation reports.

    Biology, Medicine and Bioinformatics

  14. helena-bioinformatics/noodle-mcp

    Read-only biomedical literature search over a PubMed-derived corpus by natural language or PMID/DOI/PMCID, with citation and semantic graph traversal.

    Biology, Medicine and Bioinformatics

  15. hlydecker/ucsc-genome-mcp

    Interact with the UCSC Genome Browser API to find genomes, chromosomes and more.

    Biology, Medicine and Bioinformatics

  16. JamesANZ/medical-mcp

    Query medical information, drug databases, drug interactions and clinical guidelines.

    Biology, Medicine and Bioinformatics

  17. JaviMaligno/vitamind-mcp

    Estimate solar vitamin D synthesis: whether it happens now, minutes needed by Fitzpatrick skin type and viable months by latitude, using Open-Meteo UV data.

    Biology, Medicine and Bioinformatics

  18. kushaim/practice-fusion-mcp

    Read-only FHIR access to the Practice Fusion EHR: search patients and review appointments, conditions, medications and lab results.

    Biology, Medicine and Bioinformatics

  19. longevity-genie/biothings-mcp

    Query the BioThings API for genes, genetic variants, drugs and taxonomic information.

    Biology, Medicine and Bioinformatics

  20. longevity-genie/gget-mcp

    Bioinformatics toolkit for genomics queries and analysis, wrapping the gget library.

    Biology, Medicine and Bioinformatics

  21. longevity-genie/opengenes-mcp

    Query the OpenGenes database for aging and longevity research.

    Biology, Medicine and Bioinformatics

  22. longevity-genie/synergy-age-mcp

    Query the SynergyAge database of synergistic and antagonistic genetic interactions in longevity.

    Biology, Medicine and Bioinformatics

  23. mgnirck/lecka-mcp

    Race nutrition planning for endurance athletes: carb, sodium and fluid targets plus Lecka product recommendations by race type, conditions and weight.

    Biology, Medicine and Bioinformatics

  24. musharna/plant-genomics-mcp

    Plant genomics locus lookup across Ensembl Plants, Phytozome, UniProtKB, KEGG, STRING-DB, NCBI BLAST and more, with batch and cross-source queries.

    Biology, Medicine and Bioinformatics

  25. MyMedi-AI/mymedi-ai-mcp-server

    Healthcare billing: ICD-10, CPT and HCPCS code lookup, prior authorization prediction, claims validation, denial-risk scoring and HIPAA compliance auditing.

    Biology, Medicine and Bioinformatics

  26. neptun2000/heor-agent-mcp

    Health economics and outcomes research: literature search across PubMed, NICE, CADTH, ICER and more, cost-effectiveness modeling and HTA dossier preparation.

    Biology, Medicine and Bioinformatics

  27. NyxToolsDev/dicom-hl7-mcp-server

    Bridge DICOM, HL7v2 and FHIR: cross-standard mapping, Mirth Connect channel generation, vendor private tag decoding and integration patterns.

    Biology, Medicine and Bioinformatics

  28. OHNLP/omop_mcp

    Map clinical terminology to OMOP concepts using LLMs for healthcare data standardization and interoperability.

    Biology, Medicine and Bioinformatics

  29. PantelisGeorgiadis/dicomweb-mcp-server

    Access a DICOMweb archive: search studies, series and instances, inspect metadata, read structured reports, extract PDF text and render frames.

    Biology, Medicine and Bioinformatics

  30. pkotecha-eng/aria-mcp-server

    Clinical research tools for trial coordinators and life sciences teams: real-time access to PubMed and ClinicalTrials.gov.

    Biology, Medicine and Bioinformatics

  31. pubspro/pubmed-search

    Search PubMed and summarize biomedical literature.

    Biology, Medicine and Bioinformatics

  32. Rajskij/oura-mcp

    Read-only, self-hosted access to Oura Ring sleep, readiness, activity, stress and heart rate data.

    Biology, Medicine and Bioinformatics

  33. salwks/mcp-techTrend

    Academic, code and medical-regulatory trend monitoring across arXiv, PubMed, GitHub, Hugging Face and openFDA, with newspaper-style briefings.

    Biology, Medicine and Bioinformatics

  34. SEOSiri-Official/biorobotics

    Bio-robotics engine that converts biological data from the UniProt API into Cartesian G-code coordinates.

    Biology, Medicine and Bioinformatics

  35. SidneyBissoli/medical-terminologies-mcp

    Look up medical terminologies: ICD-11, LOINC, RxNorm, MeSH, ATC, Brazil's CID-10 (DataSUS) and optionally SNOMED CT.

    Biology, Medicine and Bioinformatics

  36. sikcapri/superglookoquery

    Clinical audit of Glooko diabetes data from any pump or CGM: time in range, GMI, trends and bolus/basal analysis, adapting to the data your devices report.

    Biology, Medicine and Bioinformatics

  37. smaniches/alphafold-sovereign-mcp

    AlphaFold DB and other public biomedical sources in a local SQLite knowledge graph for structure confidence, variants, diseases, drug targets and orthology.

    Biology, Medicine and Bioinformatics

  38. smaniches/uniprot-mcp

    Query the UniProt knowledgebase (entries, features, variants, PTMs, GO terms, cross-references) with per-query SHA-256 provenance and offline replay.

    Biology, Medicine and Bioinformatics

  39. tatsuju/opdstar-nhi-mcp

    Taiwan National Health Insurance (NHI) data: rejection codes, ICD-10 to procedure mappings, audit indicators and semantic search over NHI documentation.

    Biology, Medicine and Bioinformatics

  40. the-momentum/apple-health-mcp-server

    Access and analyze exported Apple Health data.

    Biology, Medicine and Bioinformatics

  41. the-momentum/fhir-mcp-server

    Connect to FHIR servers, for example to query patient history in natural language.

    Biology, Medicine and Bioinformatics

  42. thehealthai/clarity-mcp

    Condition-aware safety checks for ingredients, products and supplements, with cited evidence verdicts, claim fact-checking and FDA recall lookup.

    Biology, Medicine and Bioinformatics

  43. thehealthai/fda-risk-radar-mcp

    FDA and NHTSA regulatory risk data: device compliance risk, 510(k) evidence, predicate chains, postmarket signals, reimbursement pathways and vehicle safety.

    Biology, Medicine and Bioinformatics

  44. thelongevityvault/decoder-3am-mcp

    Classify the likely biological cause of 3am wakeups from symptom descriptions using The Longevity Vault's five-cause framework.

    Biology, Medicine and Bioinformatics

  45. wjgoarxiv/pymol-mcp

    Headless PyMOL for molecular visualization, GROMACS/LAMMPS trajectories and clathrate-hydrate cage analysis, including H-bond networks and order parameters.

    Biology, Medicine and Bioinformatics

  46. wso2/fhir-mcp-server

    Search, retrieve, create, update and analyze clinical data via FHIR APIs, with SMART-on-FHIR authentication.

    Biology, Medicine and Bioinformatics